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Agent-Ready

Jinkō: In Silico trials for humans and agents

From clinical question to biologically grounded answer, faster.

15+ years of expertise

The world's premier mechanistic trial simulation platform

AI-assisted model building

Accelerate literature research, extract equations, and go from papers to traceable models.

Trial simulation

Simulate heterogeneous patient cohorts across millions of scenarios to find where a trial turns futile.

Virtual patients

Generate dynamic Mechanistic Twins: a simulated replica of each patient's biology.

Automation

Headless Jinkō: where agents and humans collaborate

Software is no longer only clicked. Jinkō is the scientific platform that agents can operate and humans can trust.

Collaborative workspace

One workspace where modelers, biostatisticians, biologists, and clinical trial managers work side by side with specialized AI agents.

Headless != brainless

While AI agents automate the tedious extraction and workflow assembly, the core mechanistic science remains strictly controlled by expert teams, deterministic, and bound by biological laws.

Versioned & deterministic

Resources are versioned and immutable; simulations are reproducible from their referenced inputs. An agent can re-run, diff, and revert to any prior version.

Auditability

Every action maps to a documented REST API operation. Each change spawns a labeled version snapshot recording who, what payload, and when.

Verifiable loops

The SDK exposes a practical harness for agent workflows: agents can create or edit assets, call sanity checks, inspect structured feedback, and check again.

Efficiency & scalability

Out-of-the-box parallelization runs large virtual populations and trial sweeps across many cores or a cluster.

See the poster →

AI Workflows

Skills, the operational memory

Prompts are instructions. Skills are operational memory. For Jinkō, a skill can encode how to inspect a model, prepare observed data, create a virtual population, run a trial, or download results, bringing repeatability to your workflows.

See our open source skills →
npx skills add novainsilico/jinko-skills
jinko-skills
npx skills add novainsilico/jinko-skills
12 Jinkō skills installed
claude
Run the T2D trial on the calibrated model and tell me where it goes futile.
Skill(jinko:inspect-model)
T2D_v4 · 128 species, 342 reactions · calibrated
Skill(jinko:create-vpop)
10,000 virtual patients · stratified on HbA1c and BMI
Skill(jinko:run-trial)
10,000 arms simulated · snapshot v3.1.0 · audit trail logged
Separation appears from week 12, and futility concentrates in the low baseline HbA1c stratum. The trial, the vpop, and every parameter that produced this are versioned in your workspace.

Illustrative session. The skills are open source.

Accelerate Modelling

AI-assisted model building

Cutting the time to a working model, with your experts in the loop

Literature-to-model workflow

Accelerate literature research and data scoping, automatically transform data tables and plots into editable assets for your simulation.

See the poster →

Model and trial edition

Build and edit models directly via Jinkō's AI assistant, explore trial variations and results in a few interactions.

AI-assisted model building in Jinkō
Trial simulation setup in Jinkō

Trial Optimization

Trial simulation & optimization

Bulletproofing the protocol before Phase II/III

Virtual trials & population simulations

Simulate heterogeneous patient cohorts across millions of hypothetical clinical trial scenarios to isolate hidden futility factors.

Scenario testing

Instantly test the impact of modifying inclusion/exclusion criteria on drug efficacy. Use biology to justify operational choices, fine-tune dosing strategies, and optimize outcomes.

Digital Twins

Virtual patients & Digital Twins

High-resolution mechanistic replicas

Temporal dynamics

Track how drug concentrations and target interactions change over time, so your team sees safety signals and non-responder phenotypes before they reach the clinic.

Novel mechanisms of action

Our twins run on biological laws, so a first-in-class mechanism can be simulated before any patient cohort exists even when real-world data (RWD) might be lacking.

Virtual patient readouts in Jinkō

Open Infrastructure

Collaboration, interoperability, and SDK

An open architecture for the modern bio-pharma stack

Your science shouldn't live in a silo. Jinkō is built to sit as an open, interoperable node in your pharma tech stack.

Industry standard formats

Native support for SBML, with translation pipelines for platforms such as SimBiology and Monolix.

See the poster →

Agent-first API and SDK

Compatible with the Model Context Protocol (MCP), so your own AI agents can call Jinkō simulations as a tool.

See the SDK →

Sovereign Control

Enterprise deployment

The power of Jinkō. The sovereignty of your own infrastructure

Privacy and control

Run simulations securely on your private cloud. Patient data and proprietary target equations never leave your firewall.

Clear roles and responsibilities

Manage granular team access permissions. Keep human-in-the-loop approvals strictly separated from autonomous agent executions.

Cost control

Auto-scaling simulation clusters, with no runtime premium. Budget limits protect against rogue agent loops.

Streamlined deployment

A Kubernetes-native architecture that hooks into your identity providers and biostatistics stacks.

Run your first virtual trial in under 5 minutes

A full-stack clinical simulation platform built for human experts and AI agents.

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